Topic: snakemake-workflows Goto Github
Some thing interesting about snakemake-workflows
Some thing interesting about snakemake-workflows
snakemake-workflows,Snakemake pipeline for lncRNA discovery and quantification
User: acesnik
snakemake-workflows,Pipeline for lncRNA, Circular RNA, and novel mRNA identification.
User: alipe2021
snakemake-workflows,A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data
Organization: bimsbbioinfo
snakemake-workflows,Pipeline for analysis of Dropseq single cell data
Organization: bimsbbioinfo
Home Page: http://bioinformatics.mdc-berlin.de/pigx
snakemake-workflows,Python data analysis pipeline for single cell copy number event history reconstruction
Organization: cbg-ethz
snakemake-workflows,A Snakemake workflow assembling bacterial genomes according to the standard operating procedure in the Clavel Lab
Organization: clavellab
snakemake-workflows,Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
Organization: clinical-genomics
Home Page: https://balsamic.readthedocs.io/
snakemake-workflows,snakemake workflow for random forest based feature selection on chromHMM data
User: crazyhottommy
snakemake-workflows,StaG Metagenomic Workflow Collaboration
Organization: ctmrbio
Home Page: https://stag-mwc.readthedocs.org
snakemake-workflows,Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization
User: davidebrex
snakemake-workflows,Bioinformatics-pipeline in snakemake.
User: dawneve
snakemake-workflows,:snake::wrench: Snakemake wrappers for GATK.
User: dohlee
snakemake-workflows,:snake: Snakemake wrappers for bioinformatics.
User: dohlee
snakemake-workflows,The snakemake workflow for whole-exome sequencing analysis and generating vcf files
User: hamidghaedi
snakemake-workflows,quantify-virome: identify and quantify viruses from metagenomic shotgun sequences
Organization: hivlab
snakemake-workflows,Scaling studies on high-performance clusters using Snakemake workflows
Organization: hpc-carpentry
Home Page: https://www.hpc-carpentry.org/old-hpc-workflows/
snakemake-workflows,Snakemake pipeline for Popoolation and Popoolation2
User: jlanga
snakemake-workflows,Snakemake workflow to run transdecoder + trinotate
User: jlanga
snakemake-workflows,🙋 My github profile
User: khoahd7621
snakemake-workflows,Single-cell Transcriptome and Regulome Analysis Pipeline
User: liulab-dfci
snakemake-workflows,Multisample DNAseq variant calling pipeline for use in diagnostics
Organization: lumc
snakemake-workflows,Bem vido ao meu perfil
User: mauriciolsfilho
Home Page: https://github.com/mauriciolsfilho
snakemake-workflows,ASMAPP assembly appraisal workflow. Built in snakemake, ASMAPP performs many basic and intermediate assembly appraisal tasks.
User: mrmrwinter
snakemake-workflows,Snakemake - GRASS interface
User: mwort
snakemake-workflows,A snakemake pipeline that performs variant calling of Nanopore reads from FastQ files for non-model organisms
User: myonaung
snakemake-workflows,Snakemake version of QIIME2
Organization: ohmeta
snakemake-workflows,Repository that hosts the course materials for the 2017 edition of Programming Practices for Research in Economics at the University of Zurich
Organization: pp4rs
snakemake-workflows,Management of References for Yourself
User: puriney
snakemake-workflows,This repository is exclusive to my Readme.md archive that contains all my profile, commits, profile visits and other information ...
User: renatamoon
snakemake-workflows,My Readme Profile
User: sachintha-samarathunga
snakemake-workflows,Melange - Snakemake workflow for genome annotation
User: sandragodinhosilva
Home Page: https://sandragodinhosilva.github.io/melange/
snakemake-workflows,MetScale: snakemake workflows to scale metagenome analyses
Organization: signaturescience
snakemake-workflows,Collective Snakemake workflows for easy and reproducible NGS data analysis.
User: sk-sahu
Home Page: https://sksahu.net/Snakeflows
snakemake-workflows,A cookiecutter template for Snakemake workflows
Organization: snakemake-workflows
snakemake-workflows,Documentation of the Snakemake-Workflows project
Organization: snakemake-workflows
snakemake-workflows,A workflow for creating small NGS test data sets, useful for continuous integration.
Organization: snakemake-workflows
snakemake-workflows,Snakemake pipeline to map DNA datasets to a given reference genome using BWA MEM and Samtools.
Organization: solida-core
snakemake-workflows,A simple Snakemake workflow to perform network analyses using the Python Geneset Network Analysis (PyGNA) package.
Organization: stracquadaniolab
snakemake-workflows,Detect replication slippage variants at microsatellite regions
User: tdayris-perso
snakemake-workflows,Snakemake workflow for Salmon quantification and FastQC quality controls
User: tdayris-perso
snakemake-workflows,Perform differential analysis from FastQ files with Salmon, tximport, and DESeq2
User: tdayris-perso
snakemake-workflows,Snakemake workflow designed to annotate VCF files withe SnpEff / SniSift
User: tdayris-perso
snakemake-workflows,Map and post-process your bams for SNP calling
User: tdayris-perso
snakemake-workflows,The ENCODE-DCC demo workflow in Snakemake (under development)
User: vsoch
Home Page: https://vsoch.github.io/encode-demo-workflow
snakemake-workflows,
User: xiaoqiluo
snakemake-workflows,
User: xiaoqiluo
snakemake-workflows,RBP module for bindz, a bioinformatics tool to detect regulators' binding sites on RNA sequences.
Organization: zavolanlab
Home Page: https://github.com/zavolanlab/bindz-rbp
snakemake-workflows,Bioinformatics pipeline for nanopore sequencing data
User: zhaoc1
snakemake-workflows,imputation workflow for array data using shapeit2 and impute2
User: zilong-li
snakemake-workflows,Imputation workflow for low coverage whole genome sequencing data
User: zilong-li
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