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evolutionary-computation-course's Introduction

Jupyter/IPython notebooks about genetic and evolutionary computation

Luis Martí -- http://lmarti.com

This repository contains the Jupyter/IPython notebooks used in the demonstration classes of my course "Advanced Evolutionary Computation: Theory and Practice", which I taught as part of the PhD in Electrical Engineering, Department of Electrical Engineering of the Pontifícia Universidade Católica do Rio de Janeiro.

Note: Although I am not currently giving this course I am updating the notebooks from time to time to meet software updates and remove bugs.

Available notebooks

A note on viewing the notebooks

These notebooks are meant to be viewed as slides. That is why they contain relatively few text and mostly graphical information. However, nothing stops you from viewing them as regular notebooks. Note that nbviewer allows you to switch the notebooks "slides" mode.

Click to view as slides

Offline (local) slides

  • You can convert them to slides and view them locally by using nbconvert with a command like:
$ jupyter nbconvert --to slides --post serve <a-notebook-name.ipynb>

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evolutionary-computation-course's Issues

AEC.03 - Solving the TSP with GAs

error in ploting : plot_tour(tour)
FileNotFoundError Traceback (most recent call last)
~\anaconda3\lib\site-packages\matplotlib\texmanager.py in _run_checked_subprocess(self, command, tex)
274 try:
--> 275 report = subprocess.check_output(command,
276
RuntimeError: Failed to process string with tex because latex could not be found

Error on AEC.06 tables

Hello,

The tables corresponding to the outputs 78, 80 and 82 do not showed up well.

Bye!

SAA - monte carlo

Olá Luis tudo bem?

Vi esse seu material sobre o curso e achei muito interessante. Gostaria de saber se tem algo sobre Otimização mutiobjetivos utilizando Monte Carlo.

Obrigada.

Improvements in "AEC.03 - Solving the TSP with GAs"

Hello,

I found your TSP example very useful. There is a small issue that I came across.

I found that using a set() in generate_cities(n) leads to problems with the indexing for larger problems. As a set has no fixed order the expression list(set()) in create_tour used later might reorder the elements.

There is also a TSP example in the DEAP repository:
https://github.com/DEAP/deap/blob/master/examples/ga/tsp.py

Instead of toolbox.register("mate", tools.cxOrdered) they use toolbox.register("mate", tools.cxPartialyMatched) but I don't know what exactly the difference is.

Error in Plotting: FileNotFoundError: [Errno 2] No such file or directory: 'dvipng': 'dvipng'

Hi,

I've got an error while plotting a tour in AEC.03 - Solving the TSP with GAs.ipynb int the cell with the content plot_tour(tour):

FileNotFoundError: [Errno 2] No such file or directory: 'dvipng': 'dvipng'

It came out, installing dvipng solved the problem. Maybe an installation hint would be useful?

sudo apt-get install dvipng

Best and thanks for these great courses 👍

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