Scripts used in "Similarity-based analysis of allele frequency distribution among multiple populations identifies adaptive genomic structural variants"
Marie Saitou, Naoki Masuda, Omer Gokcumen Molecular Biology and Evolution, msab313, https://doi.org/10.1093/molbev/msab313 Published: 28 October 2021"
Scripts used to calculate MU from the 1000 Genome phase 3 datasets.
Scripts used to calculate MU from Alkan et al (umpublished) datasets.
Scripts used to calculate MU from SLiM-simulated datasets.
SLiM (https://messerlab.org/slim/) scripts used for the population genetics simulation.
R scripts used to generate figures in the main texts and in the supplementaly materials