mt1022 / cubar Goto Github PK
View Code? Open in Web Editor NEWR Package for Codon Usage Bias Analysis
Home Page: https://mt1022.github.io/cubar/
License: Other
R Package for Codon Usage Bias Analysis
Home Page: https://mt1022.github.io/cubar/
License: Other
fop <- get_fop(yeast_cds)
#> Warning in `[.data.table`(bingreg, , `:=`(c("codon_b1", "codon_b2", "codon_b3",
#> : Column 'codon_b1' does not exist to remove
#> Warning in `[.data.table`(bingreg, , `:=`(c("codon_b1", "codon_b2", "codon_b3",
#> : Column 'codon_b2' does not exist to remove
#> Warning in `[.data.table`(bingreg, , `:=`(c("codon_b1", "codon_b2", "codon_b3",
#> : Column 'codon_b3' does not exist to remove
These warnings do not influence the results but should be solved.
Hello,
Thanks for this awesome package!
I am trying to get the ENC values for a large dataset of a single gene. I am stuck in the seq_to_codons function. The error showing is
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function ‘XString’ for signature ‘"NULL"’
It would be great if you could please help me with this.
Thanks,
First release:
usethis::use_news_md()
usethis::use_cran_comments()
Title:
and Description:
@return
and @examples
Authors@R:
includes a copyright holder (role 'cph')Prepare for release:
git pull
urlchecker::url_check()
devtools::check(remote = TRUE, manual = TRUE)
devtools::check_win_devel()
git push
Submit to CRAN:
usethis::use_version('minor')
devtools::submit_cran()
Wait for CRAN...
usethis::use_github_release()
usethis::use_dev_version(push = TRUE)
usethis::use_news_md()
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