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View Code? Open in Web Editor NEW[G]enomic [P]ositioning with [Py]thon
Home Page: https://pypi.org/project/gppy/
License: MIT License
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wrong result when exon number is 1
Thanks for developing this useful tools，however , when i checked the result of tiv2giv, i found something wried
[chengennong@fat02]~/Ribo_benchmark/unique_mapping/Human/preprocessing/ribotricer_chrN/orf_pred_default/SRX1254413_hisat2/test% cat test
ENST00000589578.5 0 2124
[chengennong@fat02]~/Ribo_benchmark/unique_mapping/Human/preprocessing/ribotricer_chrN/orf_pred_default/SRX1254413_hisat2/test% python /home/chengennong/Ribo_benchmark/deps/gppy/gppy/gtf.py tiv2giv \
-g /home/chengennong/Ribo_benchmark/ref/Human/gencode.v43.annotation.gtf \
-i test -a
chr19 3636600 3637410 ENST00000589578.5 ENSG00000186111.11 - 0 0 0 1 810, 0, ENST00000589578.5 0 2124
this length should be 2124， not 810 as gppy indicated.
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