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stacked-autoencoder

sts

Sequential Tree Sampler for online phylogenetics

sundials.jl

Julia interface to Sundials, including a nonlinear solver (KINSOL), ODE's (CVODE), and DAE's (IDA).

sunspider-jsx

sunspider benchmark for jsx

superlets

synaptic

architecture-free neural network library for node.js and the browser

task.js

:zap: Simplified interface for getting CPU intensive code to run on all cores (node.js, and web)

taxmaps

Ultra-efficient taxonomic mapping of NGS data

taxonomy-tools

C++ tools for NCBI taxonomy tasks

taxsbp

TaxSBP - Taxonomic structured bin packing implementation

testsetextensions.jl

Extensions to Julia's Base.Test

textbooks-with-jupyter

A template repository to quickly build an online textbook using Jekyll

texygen

A text generation benchmarking platform

tf-stanford-tutorials

This repository contains code examples for the course CS 20SI: TensorFlow for Deep Learning Research.

tgc

A Tiny Garbage Collector for C

three.geojson

Convert a geoJSON to a 3D mesh structure

time-series-classification-and-clustering-with-reservoir-computing

Library for implementing reservoir computing models (echo state networks) for multivariate time series classification and clustering.

time_series

transpairs

tre

The approximate regex matching library and agrep command line tool.

tree-swdft-2d

Implementation of the 2D Tree Radix-2 Sliding Window DFT

treebest

TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)

treebreaker

Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree

trigs

A collection of bioinformatics tools for sequence analysis, with an emphasis on Next-Generation Sequencing and Rep-Seq.

tsirsim

R package for simulating TSIR models.

turing

Final project for CME 161: Visualizing Turing patterns with Three.js

turing-drawings

Randomly generated Turing machines draw images and animations on a 2D canvas.

turing-patterns

Multi-Scale Turing Patterns

turingpatterns

Cyclic Symmetric Multi-Scale Turing Patterns in WebGL

turingpatterns.jl

A package for making multi-scale Turing patterns.