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View Code? Open in Web Editor NEWnormalization of sememd db to biolink model
normalization of sememd db to biolink model
I noticed these prefixes, which look like they may have resulted from parsing errors:
>>> MATCH (n) WITH FILTER(c IN n.xrefs WHERE SPLIT(c, ":")[1] = "NOCODE") AS xrefs UNWIND xrefs AS xref RETURN DISTINCT xref;`
"MTH:NOCODE"
"DXP:NOCODE"
"SNM:NOCODE"
"COSTAR:NOCODE"
"MMSL:NOCODE"
"MTHSPL:NOCODE"
"MCM:NOCODE"
"MTHCMSFRF:NOCODE"
They tend to be shared by a lot of nodes that aren't equivalent, e.g.:
>>> MATCH (n) WHERE "MTH:NOCODE" IN n.xrefs RETURN COUNT(n);
50013
>>> MATCH (n) WHERE "MTH:NOCODE" IN n.xrefs RETURN n.name LIMIT 5;
"Antibody to hepatitis E virus"
"ADAMTS19 gene"
"CCNE2 gene"
"Bagassosis"
"BIN1 gene"
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