Topic: ecology Goto Github

👇 Here are 883 public repositories matching this topic...

adamwilsonlabedu / spatialdatascience
ecology,Introduction to Data Science with R
Organization: adamwilsonlabedu
Home Page: http://adamwilson.us/SpatialDataScience
r data science ecology geography

agentmorris / megadetector
ecology,MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.
User: agentmorris
cameratraps machine-learning computer-vision conservation wildlife megadetector camera-traps ecology

andrewljackson / siber
ecology,ellipse and convex hull fitting package for stable isotope data
User: andrewljackson
stable-isotopes community-ecology ecology niche-modelling

aquaticecodynamics / glm
ecology,Code for the General Lake Model
Organization: aquaticecodynamics
Home Page: http://aquatic.science.uwa.edu.au/research/models/GLM/
lake model mixing hydrodynamics stratification water quality ecology glm biogeochemical

bencevans / camtrap-detector
ecology,Detect Animals, Humans and Vehicles in Camera Trap Imagery. Powered by MegaDetector v5.
User: bencevans
Home Page: https://camtrap.net/detector
camera-traps ecology megadetector ai4good conservation neural-network tauri-app hacktoberfest

blayman / artificial-life-simulator
ecology,An ecologically inspired multi-agent system. Agents are designed with neural network based decision making, and complex resource requirements.
User: blayman
Home Page: https://www.youtube.com/watch?v=JCABsCcMQ6A&t=16s
artificial-life evolutionary-algorithms multi-agent-systems multi-agent-simulation neural-networks simulation ecological-simulations ecological-modelling artificial-intelligence genetic-algorithm

bmaitner / rbien
ecology,Tools for accessing the Botanical Information and Ecology Network (BIEN) database
User: bmaitner
Home Page: http://bien.nceas.ucsb.edu/bien/
r biodiversity ecology botanical plant open-science phylogeny traits range-maps bien

cameronbodine / pingmapper
ecology,Open-source interface for processing recreation-grade side scan sonar datasets and reproducibly mapping benthic habitat
User: cameronbodine
Home Page: https://cameronbodine.github.io/PINGMapper/
aquatic ecology remotesensing sidescan sidescan-sonar sonar humminbird

carbonalyser / carbonalyser
ecology,The add-on "Carbonalyser" allows to visualize the electricity consumption and greenhouse gases (GHG) emissions that your Internet browsing leads to.
User: carbonalyser
Home Page: https://theshiftproject.org/en/carbonalyser-browser-extension/
addon carbon-emissions chrome-extension ecology firefox-addon

cboettig / noise-phenomena
ecology,:notebook: Ecology Letters review paper: Noise-driven phenomena in population biology
User: cboettig
research-compendium reproducible-research ecology stochasticity

circuitscape / omniscape.jl
ecology,Functions to compute omnidirectional landscape connectivity using circuit theory and the Omniscape algorithm.
Organization: circuitscape
Home Page: https://docs.circuitscape.org/Omniscape.jl/stable/
julia-language julia-package connectivity circuitscape circuit-analysis animal-movement landscape-ecology climate-change circuit-theory ecology

cnumr / ecocode
ecology,Reduce the environmental footprint of your software applications with this cutting-edge sonarQube plugin
Organization: cnumr
green code quality sustainability ecology environment energy

datacarpentry / python-ecology-lesson
ecology,Data Analysis and Visualization in Python for Ecologists
Organization: datacarpentry
Home Page: https://datacarpentry.org/python-ecology-lesson
carpentries data-carpentry lesson python data-wrangling data-visualisation data-visualization english ecology stable

datacarpentry / r-ecology-lesson
ecology,Data Analysis and Visualization in R for Ecologists - the version at https://github.com/datacarpentry/R-ecology-lesson-alternative will be merged on 8th July 2024
Organization: datacarpentry
Home Page: https://datacarpentry.org/R-ecology-lesson/
carpentries data-carpentry lesson r data-wrangling data-visualisation data-visualization english ecology stable

datacarpentry / spreadsheet-ecology-lesson
ecology,Data Organization in Spreadsheets for Ecologists
Organization: datacarpentry
Home Page: https://datacarpentry.org/spreadsheet-ecology-lesson
carpentries data-carpentry lesson spreadsheet spreadsheets data-management english ecology stable

datacarpentry / sql-ecology-lesson
ecology,Data Management with SQL for Ecologists
Organization: datacarpentry
Home Page: http://datacarpentry.github.io/sql-ecology-lesson
sql data-carpentry ecology carpentries lesson data-wrangling database english stable

drivendataorg / zamba
ecology,A Python package for identifying 42 kinds of animals, training custom models, and estimating distance from camera trap videos
Organization: drivendataorg
Home Page: https://zamba.drivendata.org/docs/stable/
machine-learning gpu videos jungle chimps animals conservation ecology video-processing cli

ec0lint / ec0lint
ecology,Create sustainable digital environment with ec0lint
User: ec0lint
Home Page: http://ec0lint.com/
css ecology linter typescript digital-ecology ec0lint eslint javascript website

ecojulia / diversity.jl
ecology,Julia package for diversity measurement
Organization: ecojulia
julia diversity-measurement partitioning-diversity biodiversity phylogenetic-diversity ecology

ecojulia / ecosistem.jl
ecology,Julia package for ecosystem simulation
Organization: ecojulia
julia biodiversity epidemiology ecosystem-simulation ecology simulation

ecojulia / microbiome.jl
ecology,For analysis of microbiome and microbial community data
Organization: ecojulia
microbiome julia-language ecology biology

ecojulia / spatialecology.jl
ecology,Julia framework for spatial ecology - data types and utilities
Organization: ecojulia
julia ecology macroecology biogeography

ecologicaltraitdata / traitdataform
ecology,A package to manage and compile functional trait data into predefined templates
Organization: ecologicaltraitdata
Home Page: https://ecologicaltraitdata.github.io/traitdataform/
dataset trait-datasets harmonization r-package ecology

environmentontology / envo
ecology,A community-driven ontology for the representation of environments
Organization: environmentontology
Home Page: http://www.environmentontology.org
obofoundry environment ecology ontology ecoinformatics data-science data-management sustainable-development-goals esip earth-science

eoa-team / eodal
ecology,Earth Observation Data Analysis Library
Organization: eoa-team
Home Page: https://eodal.readthedocs.io/en/latest/
data-science earth-observation geospatial gis python remote-sensing agriculture data-analysis ecology environmental-monitoring

forestgeo / fgeo
ecology,[Meta R-package on CRAN] Analyse forest diversity and dynamics
Organization: forestgeo
Home Page: https://forestgeo.github.io/fgeo/.
ecology forests dynamics forestgeo metapackage fgeo abundance tree demography habitat

gbif / pygbif
ecology,GBIF Python client
Organization: gbif
Home Page: https://pygbif.readthedocs.io/en/latest/
gbif api data biodiversity ecology

globalbioticinteractions / globalbioticinteractions
ecology,Global Biotic Interactions provides access to existing species interaction datasets
Organization: globalbioticinteractions
Home Page: https://globalbioticinteractions.org
eol ecology biology ecoinformatics globi species-interactions bioinformatics etl-framework food-webs pollinators

jeffreyevans / spatialeco
ecology,R package for spatial analysis and modelling of ecological systems
User: jeffreyevans
r r-spatial spatial raster vector ecology biodiversity conservation cran r-package

johnbaums / rmaxent
ecology,Tools for working with Maxent in R
User: johnbaums
maxent habitat-suitability sdm r ecology

lter / lterdatasampler
ecology,LTER data samples to teach environmental data science
Organization: lter
Home Page: https://lter.github.io/lterdatasampler/
data-science ecology

marosmacko / carbonfootprintcalculator
ecology,Calculate your carbon footprint, and find out how much you have to do to eliminate it!
User: marosmacko
ecology carbon-footprint carbon-emissions javascript mining

mooch443 / trex
ecology,TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
User: mooch443
Home Page: https://trex.run
machine-learning video tracking ecology automatic-visual-recognition video-recording computer-vision

mooreryan / iroki
ecology,Super snazzy online phylogenetic tree viewer with automatic customization using simple, tab-separated text files.
User: mooreryan
Home Page: https://www.iroki.net
bioinformatics phylogenetic-trees ecology microbial-ecology visualization

nceas / metacatui
ecology,MetacatUI: A client-side web interface for DataONE data repositories
Organization: nceas
Home Page: https://nceas.github.io/metacatui
metacat knb metadata data-repository science-metadata arctic-data-center metadata-editor dataone hacktoberfest hacktoberfest2021

neonscience / neon-data-skills
ecology,Self-paced tutorials that review key data literacy concepts and data analysis skills. Published materials can be found at:
Organization: neonscience
Home Page: https://www.neonscience.org/resources/learning-hub/tutorials
tutorial r neon data-skills ecology python

paternogbc / livro_aer
ecology,Este livro oferece uma introdução compreensiva aos métodos estatísticos mais utilizados em Ecologia.
User: paternogbc
Home Page: https://analises-ecologicas.com
ecology statistical-analysis statistical-learning statistical-methods

patrickcgray / deep_learning_ecology
ecology,Educational Resources on Neural Networks for Ecology and Remote Sensing
User: patrickcgray
education ecology remote-sensing teaching neural-networks

pbs-assess / sdmtmb
ecology,:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
Organization: pbs-assess
Home Page: https://pbs-assess.github.io/sdmTMB/
r glmm spatial-analysis ecology tmb species-distribution-modelling

petervanlunteren / ecoassist
ecology,Simplify camera trap image analysis with ML species recognition models based around the MegaDetector model
User: petervanlunteren
linux macos megadetector python windows cameratraps object-detection yolov5 annotation-tool deploy

poisotlab / ecologicalnetworks.jl
ecology,Everything you've never dreamed about measuring on ecological networks.
Organization: poisotlab
ecology julia networks

rremelgado / rsmove
ecology,Remote Sensing for Movement Ecology
User: rremelgado
remote-sensing movement-ecology r spatial-analysis animal-behavior machine-learning ecology animal-behaviour

sdtaylor / pyphenology
ecology,Plant phenology models in python with a scikit-learn inspired API
User: sdtaylor
Home Page: https://pyphenology.readthedocs.io
ecology ecology-modelling science plants

seananderson / glmmfields
ecology,R package for Bayesian spatial and spatiotemporal GLMMs with possible extremes
User: seananderson
r spatial-analysis extremes spatiotemporal ecology

traitecoevo / plant
ecology,Trait-Driven Models of Ecology and Evolution :evergreen_tree:
Organization: traitecoevo
Home Page: https://traitecoevo.github.io/plant
ecology evolution demography plant-physiology c-plus-plus r trait dynamic simulation science-research

valentinitnelav / plotbiomes
ecology,R package for plotting Whittaker biomes with ggplot2
User: valentinitnelav
whittaker-biomes biome ggplot2 ecology r

vegandevs / vegan
ecology,R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
Organization: vegandevs
Home Page: https://vegandevs.github.io/vegan/
ecological-modelling ecology ordination r

viame / viame
ecology,Video and Image Analytics for Multiple Environments
Organization: viame
Home Page: http://www.viametoolkit.org/
computer-vision artificial-intelligence video-search video-analytics marine-biology open-source machine-learning video-annotation image-annotation annotation-framework

wildlifedatasets / wildlife-datasets
ecology,WildlifeDatasets: An open-source toolkit for animal re-identification
Organization: wildlifedatasets
Home Page: https://wildlifedatasets.github.io/wildlife-datasets/
dataset datasets deep-learning ecology ecology-modelling machine-learning

zoonproject / zoon
ecology,The zoon R package
Organization: zoonproject
species-distribution-modelling ecology spatial-analysis workflow