Topic: gehlenborglab Goto Github
Some thing interesting about gehlenborglab
Some thing interesting about gehlenborglab
gehlenborglab,Caleydo - Visualization for Molecular Biology
Organization: caleydo
Home Page: http://caleydo.org
gehlenborglab,StratomeX for the visual exploration of genomic stratification of diseases @JKU-ICG
Organization: caleydo
Home Page: http://stratomex.caleydo.org/
gehlenborglab,Jupyter Notebooks and other code for 4CE data visualizations.
Organization: covidclinical
Home Page: https://covidclinical.net
gehlenborglab,Repository for covidclinical.net website.
Organization: covidclinical
Home Page: https://covidclinical.net
gehlenborglab,A declarative library for Python designed to create interactive multi-scale visualizations of genomics and epigenomics data.
Organization: gosling-lang
Home Page: https://gosling-lang.github.io/gos
gehlenborglab,
Organization: gosling-lang
gehlenborglab,Styling themes for Gosling.js
Organization: gosling-lang
gehlenborglab,Documentation website of Gosling.js
Organization: gosling-lang
Home Page: http://gosling-lang.org
gehlenborglab,Grammar of Scalable Linked Interactive Nucleotide Graphics
Organization: gosling-lang
Home Page: https://gosling.js.org
gehlenborglab,Javascript implementation of Zarr
User: gzuidhof
Home Page: https://guido.io/zarr.js
gehlenborglab,Fast, flexible and extensible genome browser.
Organization: higlass
Home Page: http://higlass.io
gehlenborglab,Builds a docker container wrapping higlass-server and higlass-client in nginx
Organization: higlass
gehlenborglab,A utility script to manage local docker instances of HiGlass
Organization: higlass
Home Page: http://docs.higlass.io
gehlenborglab,Multivec Tracks for Higlass
Organization: higlass
gehlenborglab,Server component for HiGlass that manages and serves tiled data
Organization: higlass
gehlenborglab,HiGlass Project Website
Organization: higlass
Home Page: http://higlass.gehlenborglab.org
gehlenborglab,A 3D genome data processing tutorial for ISMB/ECCB 2017
Organization: hms-dbmi
Home Page: https://hms-dbmi.github.io/3d-genome-processing-tutorial/
gehlenborglab,Juptyer Notebooks with Altair Examples
Organization: hms-dbmi
gehlenborglab,
Organization: hms-dbmi
gehlenborglab,Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling
Organization: hms-dbmi
Home Page: http://cisvis.gehlenborglab.org
gehlenborglab,Materials for the DeCART 2019 Summer School Data Visualization Course
Organization: hms-dbmi
gehlenborglab,Guidelines for creating medium-scale visualization software
Organization: hms-dbmi
gehlenborglab,Code for Gehlenborg Lab website.
Organization: hms-dbmi
Home Page: http://gehlenborglab.org
gehlenborglab,Genomic Visualization Catalog
Organization: hms-dbmi
Home Page: http://genocat.tools
gehlenborglab,Redesigning the Patient Portal Experience with SMART on FHIR.
Organization: hms-dbmi
Home Page: http://halyos.gehlenborglab.org/
gehlenborglab,Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.
Organization: hms-dbmi
Home Page: https://hms-dbmi.github.io/hic-data-analysis-bootcamp/
gehlenborglab,A tool to create scrollytelling-based stories with HiGlass.
Organization: hms-dbmi
Home Page: http://higlass.io
gehlenborglab,Using AWS CLI, produce a TSV summarizing AWS resources in use.
Organization: hms-dbmi
gehlenborglab,Use MAP to explore EHR data for individual patients.
Organization: hms-dbmi
gehlenborglab,R package to assess and evaluate longitudinal mHealth sensor data.
Organization: hms-dbmi
gehlenborglab,OncoThreads longitudinal cancer genomics visualization project.
Organization: hms-dbmi
Home Page: http://oncothreads.gehlenborglab.org
gehlenborglab,Jupyter Notebooks and other code for Altair-based Interactive UpSet Plots
Organization: hms-dbmi
Home Page: http://upset.plus/covid19symptoms/
gehlenborglab,An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
Organization: hms-dbmi
Home Page: https://cran.rstudio.com/web/packages/UpSetR
gehlenborglab,Data and scripts for UpSetR paper.
Organization: hms-dbmi
Home Page: http://biorxiv.org/content/early/2017/03/25/120600
gehlenborglab,A Shiny wrapper for the UpSetR R package (https://github.com/hms-dbmi/UpSetR).
Organization: hms-dbmi
Home Page: http://gehlenborglab.shinyapps.io/upsetr/
gehlenborglab,Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
Organization: hms-dbmi
Home Page: http://avivator.gehlenborglab.org
gehlenborglab,A minimal Zarr image viewer based on Viv.
Organization: hms-dbmi
gehlenborglab,Use JSON Schema to validate directory structures
Organization: hubmapconsortium-graveyard
gehlenborglab,HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.
Organization: hubmapconsortium
gehlenborglab,HuBMAP Data Portal front end
Organization: hubmapconsortium
Home Page: https://portal.hubmapconsortium.org
gehlenborglab,Given a Frictionless Table Schema, generate an Excel template with input validation
Organization: hubmapconsortium
gehlenborglab,Nozzle is a report generation toolkit for data analysis pipelines implemented in R.
Organization: parklab
Home Page: http://gdac.broadinstitute.org/nozzle
gehlenborglab,The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.
Organization: refinery-platform
Home Page: http://www.refinery-platform.org
gehlenborglab,Registry for Visualization Tool Annotations that are compatible with Refinery (https://github.com/refinery-platform/refinery-platform)
Organization: refinery-platform
gehlenborglab,Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
Organization: vitessce
Home Page: http://vitessce.io
gehlenborglab,Utils for loading HuBMAP data formats
Organization: vitessce
gehlenborglab,Python API and Jupyter widget for Vitessce
Organization: vitessce
Home Page: https://vitessce.github.io/vitessce-python/
gehlenborglab,Notebooks for HuBMAP tutorial session (January 2023)
Organization: vitessce
gehlenborglab,R API and htmlwidget for Vitessce
Organization: vitessce
Home Page: https://vitessce.github.io/vitessceR/
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