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gwasqxe

gwsem

Genome-wide Structural Equation Modeling

hiblup

:surfer: HIBLUP is an Integration of Statistical Methods Under BLUP Framework for Genomic Selection and Prediction

intassoplot

introduction_to_gwas

各种不同GWAS模型脚本

ipat

iPat allows you to perform GWAS and GS with drags and clicks!

iplgp

jwas.jl

Julia for Whole-genome Analysis Software

jwasr

R wrapper for JWAS, with shiny GUI app inside.

kaml

:bicyclist: Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction

karyoploter

基因组可视化

ldblockshow

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

lerning_code

lfelipe-ferrao.github.io

Genetic Data Analysis for Plant and Animal Breeding

lihang_book_algorithm

致力于将李航博士《统计学习方法》一书中所有算法实现一遍

linket

machine-learning_deep-learning-manual

《机器学习及深度学习笔记》是我们的机器学习培训教材，主要面向算法和数据挖掘方向。其中包含了基础数学知识、算法原理及推导、调包实现、手推实现等内容~同样也是包括了文档以及jupyter notebook脚本实现（具体到每一张图片）

mastering-machine-learning-with-r-second-edition

Mastering Machine Learning with R, Second Edition by Packt

megalmm

R package for fitting high-dimensional multivariate linear mixed effect models

metan

Package for multi-environment trial analysis

mingpcacluster

EM高斯混合模型聚类

mtag

Python command line tool for Multi-Trait Analysis of GWAS (MTAG)

mtm

多性状GWAS分析：Multivariate Gaussian Models for Genomic and Pedigree Data

mtmlsem

基于多位点多性状的SEM-GWAS

mtmm

A mixed-model approach for genome-wide association studies of correlated traits in structured populations

multlocmixmod

An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations

my-r

a small collection for my R scripts

my_wgcna

nam

NAM breeding toolbox

neural-networks-with-r

Neural Networks with R, published by Packt