Comments (7)
goodb
commented on September 24, 2024
Note that I can't seem to add @thomaspd as an assignee. If he is the 'owner' of this, then I ought to be able to do that. @pgaudet does he need to be added to the repo or something?
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goodb
commented on September 24, 2024
Perhaps @selewis might have an opinion about this?
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pgaudet
commented on September 24, 2024
This is a problem with all these repos. @kltm How can you add someone to a specific repo ? I only know how to do this via teams
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kltm
commented on September 24, 2024
@pgaudet The choices are either teams or collaborators. https://help.github.com/articles/inviting-collaborators-to-a-personal-repository/
In general, we should probably be using teams.
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pgaudet
commented on September 24, 2024
Right - should I edit teams to include other repos ?
Who should do that ?
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goodb
commented on September 24, 2024
For biopax2go-cam, check whether GAFs generated directly by Reactome are different from GAFs generated from the go-cams. Step one they should have 100% recall, step two, do the additional GAFs recapitulate more annotations generated in other ways?
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goodb
commented on September 24, 2024
closing as too ambiguous
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Related Issues (20)
- Cleanup of an ChEBI non pH7.3 chemicals
- fix errors in fructose metabolism R-HSA-5652084 HOT 2
- YeastPathways import: "source: null:*pathway-name" instead of "source: SGD:*pathway-name*" HOT 4
- providedBy: URLs inconsistent between users from same group HOT 3
- Header on the "clone evidence" popup has a gomodel: that doesn't match the model title HOT 3
- Triglyceride catabolism (R-HSA-163560)
- EGFR Downregulation (R-HSA-182971)
- Vitamin B1 (thiamin) metabolism (R-HSA-196819)
- DUPLICATE: Vitamin B1 (thiamin) metabolism (R-HSA-196819)
- Work with Reactome to modify the Reactome2GO xref file. HOT 1
- Vitamin B2 (riboflavin) metabolism (R-HSA-196843) HOT 6
- YeastPathways models have imaginary DB ref HOT 4
- Merge manually-curated YeastPathways2BP into conversion code HOT 1
- YeastPathways - Intermediate small molecules shared between reactions HOT 11
- Vitamin B5 (pantothenate) metabolism (R-HSA-199220)
- Not all drug reaction elements are deleted from model HOT 26
- Vitamins B6 activation to pyridoxal phosphate (R-HSA-964975)
- Biotin transport and metabolism (R-HSA-196780)
- Molybdenum cofactor biosynthesis (R-HSA-947581)
- Test load of Mouse and Fly Reactome Pathways HOT 8
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