Hello,
When I tried to use scvae with a loom data, everything was fine during the following step:
'scvae evaluate "xxx.loom" --split-data-set'
However, it showed the following error when I executed 'scvae evaluate "xxx.loom" --split-data-set':
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←[1mReconstructions
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←[0m
Plotting profile comparisons.
Traceback (most recent call last):
File "c:\programdata\miniconda3\lib\runpy.py", line 193, in run_module_as_main
"main", mod_spec)
File "c:\programdata\miniconda3\lib\runpy.py", line 85, in run_code
exec(code, run_globals)
File "C:\ProgramData\Miniconda3\Scripts\scvae.exe_main.py", line 7, in
File "c:\programdata\miniconda3\lib\site-packages\scvae\cli.py", line 1222, in main
status = arguments.func(**vars(arguments))
File "c:\programdata\miniconda3\lib\site-packages\scvae\cli.py", line 555, in evaluate
analyses_directory=analyses_directory
File "c:\programdata\miniconda3\lib\site-packages\scvae\analyses\analyses.py", line 1155, in analyse_results
directory=profile_comparisons_directory
File "c:\programdata\miniconda3\lib\site-packages\scvae\analyses\figures\saving.py", line 92, in save_figure
figure.savefig(figure_path)
File "c:\programdata\miniconda3\lib\site-packages\matplotlib\figure.py", line 2180, in savefig
self.canvas.print_figure(fname, **kwargs)
File "c:\programdata\miniconda3\lib\site-packages\matplotlib\backend_bases.py", line 2089, in print_figure
**kwargs)
File "c:\programdata\miniconda3\lib\site-packages\matplotlib\backends\backend_agg.py", line 530, in print_png
cbook.open_file_cm(filename_or_obj, "wb") as fh:
File "c:\programdata\miniconda3\lib\contextlib.py", line 112, in enter
return next(self.gen)
File "c:\programdata\miniconda3\lib\site-packages\matplotlib\cbook_init.py", line 447, in open_file_cm
fh, opened = to_filehandle(path_or_file, mode, True, encoding)
File "c:\programdata\miniconda3\lib\site-packages\matplotlib\cbook_init_.py", line 432, in to_filehandle
fh = open(fname, flag, encoding=encoding)
OSError: [Errno 22] Invalid argument: 'analyses\gas8000\split-random_0.9\no_preprocessing\VAE\gaussian\poisson-l_2-h_100-mc_1-iw_1-kl-bn\e_200-mc_1-iw_1\profile_comparisons\profile_comparison-"cell_113865"-linear-sorted.png'
########################
Is there any reason causing the problem?
Thanks
Po