Topic: antimicrobial-resistance-genes Goto Github
Some thing interesting about antimicrobial-resistance-genes
Some thing interesting about antimicrobial-resistance-genes
antimicrobial-resistance-genes,Plasmidome analysis to track the transfer route of AMR genes in bacteria
User: ibrahimelzahaby
antimicrobial-resistance-genes,Different approaches to identify best practices for detection of AMR genes, including: total genomic DNA and plasmid DNA extractions, solo assembly of Illumina short-reads and of ONT long-reads, and two hybrid assembly pipelines
User: iframst
antimicrobial-resistance-genes,A workflow for analysis and resistance profiling of Mycobacterium tuberculosis nanopore data with Mykrobe
Organization: iqbal-lab-org
antimicrobial-resistance-genes,A companion application for analyzing and viewing BTyper output files in aggregate
User: lmc297
antimicrobial-resistance-genes,Rapid, in silico characterization of Bacillus cereus group isolates using WGS data
User: lmc297
antimicrobial-resistance-genes,(Meta-)genome screening for functional and natural product gene sequences
Organization: nf-core
Home Page: https://nf-co.re/funcscan
antimicrobial-resistance-genes,This pipeline takes the raw metagenomic WGS reads as an input, assemble them, separate the contigs in MAGs, taxonomically classify the MAGs and quantify the ARGs in the MAGs. The pipeline is built using R Shiny and people can run end to end analysis by doing few clicks on the screen.
User: nirmal2310
antimicrobial-resistance-genes,:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
User: tseemann
antimicrobial-resistance-genes,AMU and antimicrobial resistance genes in chicken farms
Organization: viparc
Home Page: https://viparc.github.io/fluidigm/analysis.html
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