Topic: imagej Goto Github
Some thing interesting about imagej
Some thing interesting about imagej
imagej,:microscope: This is an ImageJ or Fiji plugin to identify, characterize, quantify and classify cells according to user-defined conditions.
User: acayuelalopez
imagej,A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
User: ariel-waisman
imagej,A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.
User: biologytools
Home Page: https://github.com/BiologyTools/BioGTK
imagej,A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.
User: biologytools
Home Page: https://discord.com/channels/1075990609707417600/1075990610160394302
imagej,Tiny Image in Javascript - Edge Detection Algorithms
User: bockp
Home Page: https://github.com/crazybiocomputing/times
imagej,Plugins for bone image analysis
Organization: bonej-org
imagej,Color blind friendly lookup tables for Fiji/ImageJ
User: bruvellu
imagej,Read and write ImageJ ROI format
User: cgohlke
Home Page: https://pypi.org/project/roifile
imagej,Read and write TIFF files
User: cgohlke
Home Page: https://pypi.org/project/tifffile
imagej,Matlab function to import ROIs from ImageJ
User: dylanmuir
Home Page: http://dylan-muir.com/articles/read_ij_roi/
imagej,Imagej macro to calculate the MTF based on a knife edge measurement
User: emx77
imagej,An interactive image processing program for biologists written in Python.
Organization: flika-org
Home Page: http://flika-org.github.io/
imagej,ImageJ functions and macros for working with thermal image files
User: gtatters
imagej,A Fiji plugin for object detection and tracking based on MaskRCNN.
User: hadim
imagej,A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
User: hallvaaw
imagej,Plugins for ImageJ - color space conversions and color calibration
Organization: ij-plugins
imagej,ijp-toolkit general purpose plugins for ImageJ (also known as ij-plugins_toolkit)
Organization: ij-plugins
imagej,Collection of mathematical morphology methods and plugins for ImageJ
Organization: ijpb
Home Page: http://imagej.net/MorphoLibJ
imagej,Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy
Organization: image-py
Home Page: http://imagepy.org
imagej,Use ImageJ functionality from napari
Organization: imagej
Home Page: https://napari-imagej.readthedocs.io
imagej,Java/ImageJ implementation of Zhang's camera calibration method
User: imagingbook
Home Page: http://www.imagingbook.com
imagej,Common Java library for digital image processing books by Burger & Burge (OBSOLETE!)
User: imagingbook
Home Page: http://www.imagingbook.com
imagej,Image processing software for textbooks by W. Burger & M. Burge
User: imagingbook
imagej,ImageJS--Image analysis in the browser with ImageJ
Organization: imjoy-team
Home Page: https://ij.imjoy.io
imagej,This is a plugin for ImageJ2 for multifractal analysis of 2D and 3D images. Cite: MULTIFRAC: An ImageJ plugin for multiscale characterization of 2D and 3D stack images . IG Torre, R. J. Heck and AM Tarquis. SoftwareX, 12, 100574.
User: ivangtorre
Home Page: https://imagej.net/Multifrac
imagej,Step-by-step instruction to quantify fluorescence intensities from timelapse imaging experiments
User: joachimgoedhart
imagej,KNIME Image Processing Extension
Organization: knime-ip
Home Page: https://www.knime.com/community/image-processing
imagej,Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.
User: lukmuk
imagej,Fully Ported to Python from ImageJ's Background Subtractor. Rolling ball and sliding paraboloid background subtraction algorithms.
User: mbalatsko
imagej,Modular, object-based analysis for ImageJ/Fiji
Organization: mianalysis
imagej,ImageJ macros and scripts written at the imaging facility MRI
Organization: montpellierressourcesimagerie
imagej,ImageJ plugin to read xrm files.
User: mrsutherland
imagej,ImageJ / Fiji macro to automatically correct white balance in RGB images
User: pmascalchi
imagej,ImageJ / Fiji macro to automatically export Leica LIF file as individual images (batch mode available)
User: pmascalchi
imagej,Analysis of cell migration in Igor Pro
User: quantixed
imagej,quantixed FIJI update site + more
User: quantixed
imagej,QuPath - Bioimage analysis & digital pathology
Organization: qupath
Home Page: https://qupath.github.io
imagej,FijiRelax: 3D+t multi-echo spin-echo sequences MRI analysis
User: rocsg
Home Page: https://imagej.net/plugins/fijirelax
imagej,An R Package for general purpose TIFF file I/O which plays nice with ImageJ
Organization: ropensci
Home Page: https://docs.ropensci.org/ijtiff
imagej,sciview is a tool for visualization and interaction with ND image and mesh data
Organization: scenerygraphics
imagej,Online processing plugin (Micro-Manager & ImageJ) for quality-controlled super-resolution localization imaging.
User: srmlabhust
Home Page: https://github.com/SRMLabHUST/QC-STORM
imagej,:microscope::cocktail: Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
User: tferr
Home Page: https://imagej.net/BAR
imagej,ImageJ library to detect and analyse connected components (blobs) in binary images
User: thorstenwagner
imagej,Non local means filter for ImageJ
User: thorstenwagner
imagej,Detect ridges / lines with imagej
User: thorstenwagner
imagej,Detection of Molecules plugin for ImageJ, Utrecht University
Organization: uu-cellbiology
imagej,Z-stack Depth Colorcode ImageJ FIJI plugin
Organization: uu-cellbiology
imagej,Materials for the "ImageJ/Fiji Level 1: Basics of image processing and analysis" course taught at the Wolfson Bioimaging Facility, University of Bristol.
Organization: wbif-bristol
imagej,Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, University of Bristol.
Organization: wbif-bristol
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