Comments (1)
Hej Georgios,
the script generate_GSdraft.R
does not perform gapfilling. It basically constructs a draft network that consists of those reactions, that have either sequence- or pathway level evidence. The script also adds the biomass reaction to the draft model.
We did not compare the quality of the models with the draft models generated by modelSEED. This is work in progress.
Best,
Silvio
from gapseq.
Related Issues (20)
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- what dependencies that gapseq needs? HOT 14
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