juadiegaitan Goto Github PK

repeated_measurements

Shiny App for Repeated Measurements Course

reproducibility-guide

project page for creating a guide to reproducible research

reproducible

Short intro to R Markdown, GitHub, R packages and BiocParallel

rethinking

Statistical Rethinking course and book package

rmarkdown-book

R Markdown: The Definitive Guide (published by Chapman & Hall/CRC in July 2018)

rna-seq-analysis

RNAseq analysis notes from Tommy Tang

rnaseq_nonmodel

rrio

Rio R Workshop

rsem

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

rsem_tutorial

A short tutorial on how to use RSEM

rstarthere

A guide to some of the most useful R Packages that we know about

rstats-ed

List of courses teaching R

rtpc

R package to help fit Thermal Performance Curves

rtrees

An R package to facilitate deriving phylogenies from mega-trees.

rworkshop

A repo containing the materials for the introduction to R workshop.

satc

Sex assignment through coverage

seacarb-git

Seawater carbonate chemistry with R

seed

R/Shiny application for viewing microbial community data

seqtk

Toolkit for processing sequences in FASTA/Q formats

shell-genomics

shiny_popgen

Shiny apps for teaching Population Genetics

shotcleaner

A high-throughput and modular workflow to quality control shotgun metagenomic DNA sequence libraries

shotmap

A Shotgun Metagenome Annotation Pipeline

siber

ellipse and convex hull fitting package for stable isotope data

simrrls

Simulate raw restriction-site associated DNA fastq files

simulator

An Engine for Running Simulations

sina

SINA - Reference based multiple sequence alignment

slim

Selection on Linked Mutations: A forward population genetic simulation for studying linkage effects, such as hitchhiking, background selection, and Hill-Robertson interference.

spades

SPAdes Genome Assembler

sphinxcontrib-jupyter

A Sphinx Extension for Generating Jupyter Notebooks