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:bar_chart: Gene expression in neuroexpresso database

Home Page: http://neuroexpresso.org/

License: GNU General Public License v2.0

R 76.66% Shell 0.04% JavaScript 21.23% CSS 2.07%
shiny neuroinformatics bioinformatics visualization gene-expression neuroscience neurobiology neuron mancarci-2017 neuroexpresso

neuroexpresso's Introduction

NeuroExpresso

A shiny app to visualize gene expression in brain cell types. For detailed info about the annotations feel free to send a mail. Hosted here.

Data

Expression data that makes the app tick can be found here along with all other data used in the Mancarci et al. 2017 paper.

neuroexpresso's People

Contributors

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neuroexpresso's Issues

Transparency and violin

Transparency is confusing for some people for some reason... Do something about it. Maybe add violin plots. Not possible by default in ggvis. Potentially add images...

file minValue.rds not found

Warning in gzfile(file, "rb") :
cannot open compressed file 'Data/minValue.rds', probable reason 'No such file or directory'

Futureproofing

Shiny server has now rather old package versions. It the event of an update this change needs to be reverted and ggvis package should not be updated to more than 4.7

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