Comments (2)
Thank you. Good suggestion.
For details:
- The --transprofile option can output transcript level P-site profile. The in-frame counts can be extracted/calculated from the file.
- The count you want is the sum of all counts at the in-frame positions in the ORF, right?
- I can add a new option like --inframecount, and a column of count values can be added in output ORF table with the option.
Peng
from ribotish.
Thank you for your quick response.
- The count you want is the sum of all counts at the in-frame positions in the ORF, right?
Yes, exactly.
- I can add a new option like --inframecount, and a column of count values can be added in output ORF table with the option.
This would be perfect for me.
Thank you very much for handling this. I would appreciated it if you could update the Anaconda cloud package with the new version if possible.
from ribotish.
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