Name: Dr. K. D. Murray
Type: User
Company: Max Planck Institut für Entwicklungsbiologie, Tübingen
Bio: Postdoctoral Fellow in Plant-pathogen Evolutionary Genomics.
Consultant in Bioinformatics.
Formerly at ANU, Canberra
Location: Tübingen, DE
Blog: https://kdmurray.id.au
Dr. K. D. Murray's Projects
OBSOLETE: see https://github.com/kdm9/Acanthophis
My UNOFFICIAL dev branch of tor. See torproject.org for the real thing
extra vim customisation
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
A standalone and lightweight C library
A minimal hugo theme. Clean, simple, minimalist.
a collection of knitr examples
A pipelined quality control script that utilises the UC Davis Biocore's sabre, sickle, scythe and seqqs.
De novo estimates of genetic relatedness from next-gen sequencing data
Poster on kWIP
Writeups of various things
Julia solutions/work with the LAFF MOOC
A simple and small bloom filter implementation in plain C.
Header-only C Library which makes life easier
The Nifty GNU Sequence Library
libqc++: C++11 library for next-gen sequence quality control and assessment.
A small C library, with a bioinformatic focus. Optimised for speed and a clean API
Fast, flexible zlib bindings.
Methods for examining PCA locally along the genome.
Logging package for julia
LPI.py: Lineage Probablity Index calculation in Python
Parser for systems which only have `ls -lR` available
A diffuser for the YN24-EX macro flash
:envelope: Deduplicate mails from a set of maildir folders.
Code to create a PRG from a Multiple Sequence Alignment file