Topic: indel Goto Github
Some thing interesting about indel
Some thing interesting about indel
indel,Lightweight and memory efficient reader for PLINK BED files. It supports both SNP-major and individual-major formats. Written in pure Python.
Organization: computational-genomics-bsc
indel,Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
Organization: gear-genomics
Home Page: https://www.gear-genomics.com/
indel,Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
User: nickveltmaat
indel,Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature
User: orangesi
indel,🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
User: shixiangwang
Home Page: https://shixiangwang.github.io/sigminer/
indel,Python library for simple and complex indels.
Organization: stjude
Home Page: https://indelpost.readthedocs.io/en/latest/
indel,Workflow for biological validation of germline SNP and indel variant datasets.
Organization: sydney-informatics-hub
indel,acorn is an R package that examines various features of de novo variants including subsetting DNVs by individual, variant type, or genomic region; calculating features including variant change counts, lengths, and presence/absence at CpG sites; and characteristics of parental age and number of DNVs.
Organization: tnturnerlab
Home Page: https://pubmed.ncbi.nlm.nih.gov/37660114/
indel,Genome assembly and variant benchmarks for Chinese Quartet
Organization: xjtu-omics
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