Topic: omics-data-integration Goto Github
Some thing interesting about omics-data-integration
Some thing interesting about omics-data-integration
omics-data-integration,Analysis of proteomics datasets obtained from ChIP-SICAP experiments in HEK cells
User: adityamahadevaniyer
omics-data-integration,Curated list of analysis pipelines for biological & clinical interpretation of data-driven findings
User: akatrib
omics-data-integration,Multimodal Variational Autoencoder dedicated to omics data integration
User: annkamsk
omics-data-integration,IgemRNA is an open access toolbox for transcriptome data statistical and biochemical network topology-based analysis. IgemRNA was developed in the MATLAB environment in order to take advantage of the up-to-date and most commonly distributed GSM modelling tool Cobra Toolbox 3.0 and spreadsheet file capabilities.
User: bigdatainsilicobiologygroup
omics-data-integration,Metabolic Engineering Workbench
Organization: biosystemsum
Home Page: https://mewpy.readthedocs.io
omics-data-integration,Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat
User: cafferychen777
Home Page: https://www.microbiomestat.wiki/
omics-data-integration,MicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
User: cafferychen777
Home Page: https://www.microbiomestat.wiki/
omics-data-integration,DecoFlex deconvolution method for Omic data implemented as DecoFlexR
User: crhisto
omics-data-integration,TBN_learning is a MATLAB implemented hybrid algorithm for learning the structure of transcriptional Bayesian networks on a genome-wide scale.
User: esauta
omics-data-integration,Code for Zhang, Wei, Slowikowski, Fonseka, Rao, et al, Nature Immunology, 2019. Single-cell transcriptomics and proteomics data analysis and integration for rheumatoid arthritis synovial tissue. These integrative strategies can be generalized to any other diseases.
Organization: fanzhanglab
omics-data-integration,Cluster patient based on their multiomics data utilizing graph autoencoders
User: ferdinand-popp
omics-data-integration,GenoCraft: A Comprehensive, User-Friendly Web-Based Platform for High-Throughput Omics Data Analysis and Visualization
User: futianfan
Home Page: https://genocraft.stanford.edu/
omics-data-integration,"DNA methylation and gene expression integration in cardiovascular disease"
User: gpalou4
omics-data-integration,A Rust accelerated library for annotation and preparing multi-omics data for training deep learning models
Organization: ikmb
omics-data-integration,Tool for the reconstruction of context-specific metabolic models based on omics data from several sources
User: jorgeacgomes
omics-data-integration,Discovering biomarkers for meningitis by multivariate integration of multi-omics and clinical data
User: krassowski
omics-data-integration,Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
User: krassowski
Home Page: https://doi.org/10.3389/fgene.2020.610798
omics-data-integration,GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]
User: ladyson1806
Home Page: https://ladyson1806.github.io/SerohijosLab-piQTL/
omics-data-integration,Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host with or without metabolomics data
Organization: lozuponelab
omics-data-integration,
User: mbongaerts
omics-data-integration,Multi-omics differential expression and integration using PPI networks
Organization: mendenlab
omics-data-integration,Diversity-based enumeration of optimal context-specific metabolic networks
Organization: metexplore
omics-data-integration,diversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library
Organization: metexplore
Home Page: https://forgemia.inra.fr/metexplore/cbm/dexom-python
omics-data-integration,Code to reproduce preprocessing analysis of IBD dataset from the Human Microbiome Project. This work will provide a walk through analysis tool for the scientific community with less technical knowledge on data science and machine learning.
User: muia2021pl
omics-data-integration,Nara Marella
User: nara3m
Home Page: https://n3m.pages.dev
omics-data-integration,This repository is the code source for the RegOmics tool - Regulatory extraction for Omics data.
User: nhannguyen000
Home Page: https://nhannguyen.shinyapps.io/RegOmics_Rshinyapp/
omics-data-integration,Bayesian survival models for high-dimensional data
Organization: ocbe-uio
omics-data-integration,The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
Organization: opencobra
Home Page: https://opencobra.github.io/cobratoolbox
omics-data-integration,:package: Omics Data Analysis Tools
User: pcastellanoescuder
omics-data-integration,MOFA (Multi-Omics Factor Analysis) is a computational framework and statistical method designed for the integration and analysis of multi-omics data.
User: saifeldeen-bio
omics-data-integration,Probabilistic O2PLS
User: selbouhaddani
Home Page: https://doi.org/10.1111/rssc.12583
omics-data-integration,Calculate correlation between two omics data
User: shashank-ku
omics-data-integration,Modeling the metabolic changes during the epithelial-to-mesenchymal transition.
Organization: sriram-lab
Home Page: https://sriram-lab.github.io/emt-cobra/
omics-data-integration,Constraint-based metabolic modeling software from the Chandrasekaran Lab
Organization: sriram-lab
Home Page: https://www.sriramlab.org/
omics-data-integration,Genome-scale model of Yarrowia lipolytica.
Organization: sysbiochalmers
Home Page: http://www.nature.com/articles/npjsba20165
omics-data-integration,data analytics & machine learning meet genetics @ AUC
User: systems-genomics-lab-auc
Home Page: https://systemsgenomics.io
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