Topic: zebrafish Goto Github
Some thing interesting about zebrafish
Some thing interesting about zebrafish
zebrafish,Collection of scripts for running data processing of light sheet data
User: animadversio
zebrafish,SABER: Selection of Amplicon Barcodes from Experimental Replicates
Organization: blachlylab
zebrafish,A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.
Organization: brainglobe
zebrafish,This is a set of bash wrapper scripts for STAR that simplify it's setup and use with a set of pre-defined parameters.
User: carlescn
zebrafish,RNA-seq analysis for zebrafish with muscle injury
User: cenk-celik
zebrafish,Behavioral and Transcriptomic Analyses of mecp2 Function in Zebrafish
User: colbyford
Home Page: https://onlinelibrary.wiley.com/doi/full/10.1002/ajmg.b.32981
zebrafish,Zebrafish embryo fluorescence quantification
User: davidstirling
zebrafish,Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes
User: dgavr
Home Page: https://www.biorxiv.org/content/biorxiv/early/2017/11/22/213611.full.pdf
zebrafish,Repository for the article "Distributed chromatic processing at the interface between retina and brain in the larval zebrafish", Guggiana et al. 2021, Curr. Bio.
User: drguggiana
Home Page: https://www.sciencedirect.com/science/article/pii/S0960982221001536
zebrafish,#GliaMorph - Toolkit to Process and Analyse Mรผller Glia Morphology
User: elisabethkugler
Home Page: https://www.elisabethkugler.com/
zebrafish,#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720
User: elisabethkugler
Home Page: https://www.elisabethkugler.com/
zebrafish,Zebrafish tracking made simple.
Organization: emphazis-org
Home Page: http://emphazis.org/
zebrafish,This is a collection of Knime workflows developed for the analysis of the data obtained with the FishInspector software
User: eteixido
zebrafish,1-week project for Champalimaud Research
User: giobbu
Home Page: https://fchampalimaud.org/champalimaud-research
zebrafish,Obesity impairs cognitive function with no effects on anxiety-like behaviour in zebrafish
User: godino-gimeno-a
Home Page: https://zantiks.com/protocols/pavlovian-avoidance-learning
zebrafish,Code for "Convergent Temperature Representations in Artificial and Biological Neural Networks"
User: haesemeyer
Home Page: https://www.cell.com/neuron/fulltext/S0896-6273(19)30601-4
zebrafish,Shiny app that recopilates all gene expression of zebra fish and informs about the tissue and developmental stage in which the gene is expressed.
User: igarcia17
zebrafish,Toolkit for providing visual stimuli to zebrafish larvae and mice.
User: jordan-g
zebrafish,Software for performing offline tracking of zebrafish larvae.
User: jordan-g
zebrafish,Behaviour analysis tracking and data analysis software using machine vision to track larval zebrafish behaviour. Software is built using C++,QT and OpenCV, while R scripts are used for data analysis and figure generation.
User: kostasl
zebrafish,Data packages for the research project "Participation of serotonin on zebrafish aggression"
User: lanec-unifesspa
zebrafish,Data packages for the research project "Behavioral and biochemical effects of ethanol withdrawal in zebrafish"
User: lanec-unifesspa
zebrafish,This repo contains the files to generate an interactive view of a feature set in the tensorflow embedding projector interface.
User: laulauthom
zebrafish,Network flow model of the zebrafish trunk vasculature (Control and Wasp Mutant data included) as part of the study presented by Rosa et. al. 2022 (https://journals.biologists.com/dev/article/149/3/dev200195/274169)
User: ltedgar-ed
zebrafish,Early life GC exposed time-series mRNA-seq analysis and DNA methylome
User: minkechoi
zebrafish,Computing functional maps in zebrafish brain
User: nvladimus
zebrafish,A vocabulary for describing Zebrafish Phenotypes
Organization: obophenotype
Home Page: https://obophenotype.github.io/zebrafish-phenotype-ontology/
zebrafish,:fish: Zebrafish Phenotype Ontology: Build Tools (OBSOLETE)
Organization: obophenotype
zebrafish,Set of functions, scripts and notebooks used in the brain-wide auditory processing project
Organization: scott-lab-qbi
zebrafish,Code used for analysis in the publication: Disentangling the link between zebrafish diet, gut microbiome succession, and Mycobacterium chelonae infection. Don't hesitate to reach out with any questions.
User: sielerjm
Home Page: https://doi.org/10.1186/s42523-023-00254-8
zebrafish,NemoTrainer
User: singhb13
zebrafish,Software for analyis of zebrafish embryo sponaneous tail contractions and photomotor response
User: sscholz-ufz
zebrafish,
User: suzaku-x
zebrafish,A simple tool for zebrafish brain visualization.
User: suzaku-x
zebrafish,A lab rotation with the systems neuroscience lab, University of Tuebingen, where we tested whether color contrast contributed to encoding motion in direction selective cells of the zebrafish optic tectum.
User: weygoldt
zebrafish,Independent project I undertook to perform a full ChIP-Seq analysis of the transcription factor Nanog in Zebrafish embryos.
User: yogionbioinformatics
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