I'm having an issue installing cellxgene_VIP at config.sh step
/config.sh
Cloning into 'cellxgene'...
remote: Enumerating objects: 15941, done.
remote: Counting objects: 100% (640/640), done.
remote: Compressing objects: 100% (401/401), done.
remote: Total 15941 (delta 295), reused 461 (delta 231), pack-reused 15301
Receiving objects: 100% (15941/15941), 202.22 MiB | 6.54 MiB/s, done.
Resolving deltas: 100% (11203/11203), done.
Note: switching to 'bedbc87ed6178cd00a586feac3e99d4912d1c74e'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at bedbc87 Release 0.16.7
sed: 1: "server/requirements.txt": bad flag in substitute command: 'q'
sed: 1: "server/requirements.txt": bad flag in substitute command: 'q'
sed: 1: "cellxgene/client/index_ ...": command c expects \ followed by text
sed: 1: "cellxgene/client/src/co ...": command c expects \ followed by text
sed: 1: "cellxgene/client/src/co ...": command c expects \ followed by text
sed: 1: "cellxgene/client/src/ut ...": command c expects \ followed by text
rm -rf build/ client/build build dist cellxgene.egg-info
cd server && /Applications/Xcode.app/Contents/Developer/usr/bin/make clean
rm -f common/web/templates/index.html
rm -rf common/web/static
rm -f common/web/csp-hashes.json
cd client && /Applications/Xcode.app/Contents/Developer/usr/bin/make clean
rm -rf node_modules
rm -f tests/screenshots/.png
cd client && /Applications/Xcode.app/Contents/Developer/usr/bin/make ci build
npm ci
/bin/bash: npm: command not found
make[1]: *** [ci] Error 127
make: *** [build-client] Error 2
pip uninstall -y cellxgene || :
WARNING: Skipping cellxgene as it is not installed.
pip install dist/cellxgene.tar.gz
WARNING: Value for scheme.headers does not match. Please report this to pypa/pip#9617
distutils: /Users/miniconda3/envs/VIP/include/python3.8/UNKNOWN
sysconfig: /Users/miniconda3/envs/VIP/include/python3.8
WARNING: Additional context:
user = False
home = None
root = None
prefix = None
WARNING: Requirement 'dist/cellxgene*.tar.gz' looks like a filename, but the file does not exist
Processing ./dist/cellxgene*.tar.gz
ERROR: Could not install packages due to an OSError: [Errno 2] No such file or directory: '/Users/cellxgene_VIP-master/cellxgene/dist/cellxgene*.tar.gz'
make: *** [install-dist] Error 1
cp: /Users/miniconda3/envs/VIP/lib/python3.8/site-packages/server/common/web/static/.: No such file or directory
sed: 1: "/Users/minico ...": bad flag in substitute command: 'n'
ls -l /Users/miniconda3/envs/VIP/lib/python3.8/site-packages/server/common/web/static/.
ls: /Users/miniconda3/envs/VIP/lib/python3.8/site-packages/server/common/web/static/.: No such file or directory
thanks !