Topic: fungi Goto Github
Some thing interesting about fungi
Some thing interesting about fungi
fungi,Preprocessing and differential expression analysis for QuantSeq 3' mRNA-seq data
User: akshayparopkari
fungi,Public repository of data and analyses from Dirks and Jackson (2020), "Community structure of Arbuscular Mycorrhizal Fungi in Soils of Switchgrass Harvested for Bioenergy", Applied and Environmental Microbiology 86 (19)
User: aldendirks
fungi,This project aims to address two ideas, bringing people together into a forest environment to experience the positive elements of mental health and teaching a few types of fungi along with their identifiable features and edibility.
User: alperenkbd
fungi,SCGid, a consensus approach to contig filtering and genome prediction from single-cell sequencing libraries
User: amsesk
fungi,Taming Fine-root Systems Complexity with TAM(Transport and Absorptive fine roots with Mycorrhizal funig) in ecosystem and biosphere modelling
User: bioatmosphere
fungi,Mothur procedures for 16S and ITS analysis
Organization: biocorecrg
fungi,
User: brookesloci
fungi,CATAStrophy predicts filamentous plant pathogen lifestyle characteristics based on their CAZyme composition.
Organization: ccdmb
fungi,Fungal Identification Pipeline
User: changwanseo
fungi,GenBank Record downloader for taxonomists
User: changwanseo
fungi,An R-shiny package to analyse and visualise fungal gene expression data
User: cparsania
Home Page: https://cparsania.shinyapps.io/FungiExpresZ/
fungi,A spatially explicit trait- and individual-based microbial systems modelling framework
Organization: dement-model
fungi,A device to promote plant-based protein and open-source tools so that everyone can make them at home for the benefit of our lives and our planet
Organization: domingoclub
Home Page: https://domingoclub.com/documentation/domingo-fermenter
fungi,Domingo Fermenter software source code
Organization: domingoclub
fungi,Interactive 3D fungi models built with Three.js
User: eslam-nasser
Home Page: https://eslam-nasser.github.io/
fungi,Assembly and phylogentic analysis pipeline for draft genome of a Pestalotiopsis fungi.
Organization: everymanbio
Home Page: https://everymanbio.com/
fungi,Antimicrobial activity prediction for fungal effector candidates
User: fantin-mesny
fungi,Tool to predict eukaryotic signal peptides. In addition, prediction of toxin and fungi signal peptides is also done.
Organization: gardner-binflab
Home Page: https://tisigner.com/razor
fungi,A small android application project listing commonly used microbiology culture media.
User: godrigos
fungi,Analyzing microbiome data from Gigante, Barro Colorado, Panama. Part of an Undergraduate Thesis (defended on May 13th, 2022).
User: gromulus-romulus
fungi,The genome of Blastocladiella emersonii
User: guyleonard
fungi,A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
User: guyleonard
fungi,An R package for enabling the use of fungarium collection data in comprehensive trait analyses.
User: hjsimpso
fungi,Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0
User: janasperschneider
fungi,Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes
User: janasperschneider
fungi,All scripts and pipelines related to inferring ploidy, hybridization and MAT locus architecture in the lichen symbionts from the genus Letharia
Organization: johannessonlab
fungi,creating hybrid-gene phylogenetic trees for diversity analyses
User: jtfouquier
fungi,Implementations of the hyphal growth model of Balmant et al., PLoS One, 10(3), 2015.
User: leandroscholz
fungi,pre release of fungi language. Its a jsr version and documentation for fungi.
User: marufhasan24
Home Page: https://github.com/fungilang/fungi
fungi,A package for arbuscular mycorrhyzal fungi colonization
User: mchiapello
Home Page: https://mchiapello.github.io/Ramf/
fungi,A website for sharing observations of mushrooms.
Organization: mushroomobserver
Home Page: https://mushroomobserver.org
fungi,AMPtk: Amplicon ToolKit for NGS data (formally UFITS)
User: nextgenusfs
Home Page: http://amptk.readthedocs.io/
fungi,A structured controlled vocabulary for the anatomy of fungi
Organization: obophenotype
Home Page: https://obofoundry.org/ontology/fao
fungi,Code and data for my scientific publications
User: onco-p53
fungi,πCatalogue of Life toolkit for R
User: otoliths
Home Page: https://otoliths.github.io/SP2000
fungi,A script to check fungus names for the most up to date nomenclature according to Species Fungorum π
User: rowena-h
fungi,Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 π£
User: rowena-h
fungi,Scripts for Hill et al. (in review) πΎ
User: rowena-h
fungi,Script and data for Hill et al. (2021) doi: 10.3389/fmicb.2021.643731 π
User: rowena-h
fungi,Light weight NCBI taxonomy browser app made in Electron Fiddle
User: scoobyhax
Home Page: https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=4751
fungi,π¦ SporeFlow: Fungal ITS metataxonomics pipeline
User: sergioalias
fungi,Oxidative stress response of Candida glabrata.
User: sethiyap
fungi,WIP & POC: Count Viral and other non-human genome signatures in Human NGS data
User: snewhouse
fungi,UFCG: Universal Fungal Core Genes
Organization: steineggerlab
Home Page: https://ufcg.steineggerlab.com
fungi,A dynamic database of fungal trait measurements
Organization: traitecoevo
fungi,Code associated with Fischer, et al (2021) "Pyrolyzed Substrates Induce Aromatic Compound Metabolism in the Post-fire Fungus, Pyronema domesticum"
Organization: traxlerlab
Home Page: https://doi.org/10.3389/fmicb.2021.729289
fungi,CAN YOU EAT IT is a web application that allows users to identify fungi by location & season.
User: tylerhuyser
fungi,An e-book about the evolution and diversity of microbial eukaryotes including fungi.
Organization: uu-microbial-eukaryotes
fungi,A pipeline for metabarcoding fungi and other eukaryotes with full-length ITS sequenced with PacBio
User: vmikk
Home Page: https://next-its.github.io
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