Topic: cnv Goto Github
Some thing interesting about cnv
Some thing interesting about cnv
cnv,Provides conversion from a string to specific Go type
User: ake-persson
cnv,Polymorphic Edge Detection - An efficient polymorphism detector for NGS data
User: akiomiyao
cnv,DupFinder: A tools to detect the duplicated genes using Illumina and Nanopore sequencing data
User: assane-mbodj
cnv,In this repository I backup the pipelines I write for the project I am involved
User: auroramaurizio
cnv,This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm-level copy-number variant calls and arm-level weighted average log2 segment means from segmented copy number data.
Organization: beroukhim-lab
cnv,A tool to call CNV (Copy Number Variation) from bulk ATAC-Seq data
User: biomystery
cnv,Copy number estimation of highly duplicated sequences
User: dpastling
cnv,Copy Number Variation
User: flowhub-team
cnv,A pipeline for detecting Somatic Insertion of DE novo RETROcopies
Organization: galantelab
Home Page: https://sideretro.readthedocs.io
cnv,Materials & Methods for CNV calling with Genalice software against a benchmark dataset
User: genalice
Home Page: http://www.genalice.com/
cnv,ClassifyCNV: a tool for clinical annotation of copy-number variants
Organization: genotek
cnv,θΏη€δ½η»θηͺεζ£ζ΅ζ΅η¨οΌη»η»γcfDNAεε―οΌιθ¦ζε―Ήη §οΌ
User: haoziyeung
cnv,A collection of miscellaneous bioinformatics scripts
User: hernanmd
cnv,Workflow for running PennCNV with Affymetrix platform files
User: hernanmd
cnv,Workflow for running PennCNV with Illumina platform final report
User: hernanmd
cnv,MSDS Thesis - Pan-Collagen Survival Analysis of CNV in Ovarian Cancer
User: hodgesr2
cnv,Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
Organization: icbi-lab
Home Page: https://infercnvpy.readthedocs.io/en/latest/
cnv,What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.
Organization: illumina
cnv,Short reads aligner for NIPT/CNV
User: jia-zhuang
cnv,Dzyaloshinskii-Moriya interaction for crystallographic class Cnv
Organization: joommf
cnv,R Package to compare copy number variant (CNV) results from multiple samples/methods
Organization: krasnitzlab
Home Page: https://krasnitzlab.github.io/CNVMetrics/
cnv,
User: kristinakeuper
cnv,Walk through Red Hat MTV
User: latouchek
cnv,A workflow for using SpeedSeq to align and call SVs from WGS data
User: laura-budurlean
Home Page: https://github.com/laura-budurlean/SV-calling-with-SpeedSeq
cnv,Annotation and Ranking of Structural Variation
User: lgmgeo
cnv,A fork of the project Excavator2 from sourceforge.
User: matheuscburger
cnv,CmiRClustFinder v1.0: a tool for identification of CNV co-locolized miRNA, miRNA clusers and genes in TCGA cancer cohorts.
User: msls-bioinfo
cnv,A high-accuracy tool for integrating scDNA-seq and scRNA-seq data
Organization: nakhlehlab
cnv,A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads
Organization: nf-cmgg
Home Page: https://nf-cmgg.github.io/structural/
cnv,Workflow for Sequenza, cellularity and ploidy
Organization: oicr-gsi
cnv,The performance of individual CNV detection software and state-of-the-art sequencing. All analyses were performed using the Python and R programming languages.
User: orangepomeranian
cnv,Copy number variant caller and depth visualization utility for PacBio HiFi reads
Organization: pacificbiosciences
cnv,Using Convolutional Neural Networks to model an association between a genomic sequence and the number of sequenced reads that align to it
User: petermchale
cnv,Hidden Markov Model based Copy number caller
User: redndgreen8
cnv,CNV detection for prokaryote genomes using NGS sequencing data
User: robinjugas
cnv,eXome Hidden Markov model (XHMM) - Copy Number Variants (CNVs) from Whole Exome Sequencing Data
User: rrafiee
cnv,This project compares two learning paradigm, namely transfer-learning and self-supervised learning in a classification task of three retina disorders CNV, DME and DUSEN in addition to the normal condition using an OCT B-scans
User: saeedshurrab
cnv,Epicopy R package for CNV identification from methylation microarrays.
User: sean-cho
cnv,π² An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
User: shixiangwang
Home Page: https://shixiangwang.github.io/sigminer/
cnv,Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.
Organization: single-cell-genetics
Home Page: https://xclone-cnv.readthedocs.io/en/latest/
cnv,An R package to integrate and analyze CNV calling results from multiple methods in a uniformed and standardized manner
User: sinomem
cnv,Official code repository for JAX-CNV
Organization: thejacksonlaboratory
cnv,PYRUS is a plotting tool that uses tabix files to create line graphs from bed file data. Utilization of PYRUS includes having a quick plotter for copy number variation within a given chromosomal range of a referenced bed file.
Organization: tnturnerlab
cnv,Bioinformatics CNV Detection with Random Forest Model
User: vidhurva
cnv,cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data
Organization: xwanglabthu
Home Page: https://xwanglabthu.github.io/cfDNApipe/
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